Algoritmos de procesado de señal basados en Non-negative Matrix Factorization aplicados a la separación, detección y clasificación de sibilancias en señales de audio respiratorias monocanal

La auscultación es el primer examen clínico que un médico lleva a cabo para evaluar el estado del sistema respiratorio, debido a que es un método no invasivo, de bajo coste, fácil de realizar y seguro para el paciente. Sin embargo, el diagnóstico que se deriva de la auscultación sigue siendo un diagnóstico subjetivo que se encuentra condicionado a la habilidad, experiencia y entrenamiento de cada médico en la escucha e interpretación de las señales de audio respiratorias. En consecuencia, se producen un alto porcentaje de diagnósticos erróneos que ponen en riesgo la salud de los pacientes e incrementan el coste asociado a los centros de salud. Esta Tesis propone nuevos métodos basados en Non-negative Matrix Factorization aplicados a la separación, detección y clasificación de sonidos sibilantes para proporcionar una vía de información complementaria al médico que ayude a mejorar la fiabilidad del diagnóstico emitido por el especialista. Auscultation is the first clinical examination that a physician performs to evaluate the condition of the respiratory system, because it is a non-invasive, low-cost, easy-to-perform and safe method for the patient. However, the diagnosis derived from auscultation remains a subjective diagnosis that is conditioned by the ability, experience and training of each physician in the listening and interpretation of respiratory audio signals. As a result, a high percentage of misdiagnoses are produced that endanger the health of patients and increase the cost associated with health centres. This Thesis proposes new methods based on Non-negative Matrix Factorization applied to separation, detection and classification of wheezing sounds in order to provide a complementary information pathway to the physician that helps to improve the reliability of the diagnosis made by the doctor.Tesis Univ. Jaén. Departamento INGENIERÍA DE TELECOMUNICACIÓ

Vitamin D deficiency and non-infectious uveitis:A systematic review and Meta-analysis

Background: Vitamin D plays a critical role in immunomodulation, and its deficiency is implicated in the pathogenesis of several autoimmune diseases. Nevertheless, its relationship with non-infectious uveitis (NIU), an inflammatory ocular disorder, remains inconclusive. Methods:A systematic search was conducted in three databases from database inception until May 8, 2023, to investigate the potential relationship between vitamin D deficiency and NIU. We included observational studies reporting the measurement of vitamin D levels in patients with NIU and healthy controls without restriction of language or date of publication. Three pairs of authors independently screened the title and abstracts for potential eligibility and then in full text. A third author resolved disagreements. Three pairs of independent reviewers abstracted the data from the fully reviewed records and evaluated the risk of bias. We followed The MOOSE and PRISMA guidelines. Random effects meta-analyses were used for primary analysis. Studies not included in the meta-analysis were summarized descriptively. This review was registered in PROSPERO: CRD42022308105. Findings: Of 933 records screened, 11 studies were included, and five were meta-analyzed, encompassing 354 cases and 5728 controls (mean participant age ranging from 7.1 to 58.9 years). Patients with vitamin D deficiency exhibited an Odds Ratio of 2.04 (95% CI = 1.55–2.68, P &lt; 0.00001) for developing NIU compared to controls. Overall, potential sources of bias were low across most studies. Interpretation: Our findings suggest that vitamin D may play an essential role in the pathophysiology of NIU. While the included studies demonstrated generally low potential bias, additional rigorous prospective studies are necessary to confirm these findings and further elucidate the underlying mechanisms involved. Vitamin D supplementation could represent a possible therapeutic strategy for preventing or managing NIU if substantiated. Clinicians should consider screening for and addressing vitamin D deficiency in patients with or at risk for NIU.</p

Enumeration and Characterization of Circulating Tumor Cells in Patients with Hepatocellular Carcinoma Undergoing Transarterial Chemoembolization

Circulating tumor cells (CTCs), and particularly circulating cancer stem cells (cCSC), are prognostic biomarkers for different malignancies and may be detected using liquid biopsies. The ex vivo culture of cCSCs would provide valuable information regarding biological aggressiveness and would allow monitoring the adaptive changes acquired by the tumor in real time. In this prospective pilot study, we analyzed the presence of EpCAM+ CTCs using the IsoFlux system in the peripheral blood of 37 patients with hepatocellular carcinoma undergoing transarterial chemoembolization (TACE). The average patient age was 63.5 ± 7.9 years and 91.9% of the patients were men. All patients had detectable CTCs at baseline and 20 patients (54.1%) showed CTC aggregates or clusters in their peripheral blood. The increased total tumor diameter (OR: 2.5 (95% CI: 1.3–4.8), p = 0.006) and the absence of clusters of CTCs at baseline (OR: 0.2 (95% CI: 0.0–1.0), p = 0.049) were independent predictors of a diminished response to TACE. Culture of cCSC was successful in five out of thirty-three patients, mostly using negative enrichment of CD45− cells, ultra-low adherence, high glucose, and a short period of hypoxia followed by normoxia. In conclusion, the identification of clusters of CTCs before TACE and the implementation of standardized approaches for cCSC culture could aid to predict outcomes and to define the optimal adjuvant therapeutic strategy for a true personalized medicine in hepatocellular carcinoma

A Regional Red List of Montane Tree Species of the Tropical Andes: Trees at the top of the world

Andean montane forests are a major global conservation priority owing to their biological richness and high level of species endemism. Botanically the Andes are very rich in species but they remain relatively unstudied. In common with montane forests elsewhere in the world, Andean forests are of great value for the provision of ecosystem services relating to water supply, regulation of regional climate and the capture and storage of carbon. The forests and their component species are however under threat. This report summarises information drawn from a wide variety of sources to provide a regional Red List of trees of Andean tropical montane forests. The species evaluation process has drawn on published national red lists of threatened species, botanical literature, specimen databases, forestry information and expert knowledge. The IUCN Red List Categories and Criteria have been used for the evaluation and a component of Natalia?s PhD study has been to evaluate their use for species with limited and dispersed data. Understanding the geographical distribution of the species is very important in conservation assessment. The maps produced for this study are a valuable starting point for the Red Listing and a baseline for monitoring impacts of climate change. In this assessment 70 species are recorded as globally threatened based on the IUCN Red List of Categories and Criteria out of 127 tree species evaluated. In addition 165 national endemic trees of the region have previously been evaluated as globally threatened based on the same IUCN process. In total therefore 235 tree species are currently considered to be threatened with extinction within the Andean montane forests.Fil: Tejedor Garavito , Natalia. Bournemouth University; Reino UnidoFil: Álvarez Dávila, Esteban. Jardín Botánico de Medellín; ColombiaFil: Caro, Sandra Arango. Missouri Botanical Garden; Estados UnidosFil: Murakami, Alejandro Araujo. Museo de Historia Natural Noel Kempff Mercado; BoliviaFil: Baldeón, Severo. Universidad Nacional Mayor de San Marcos; PerúFil: Beltrán, Hamilton. Universidad Nacional Mayor de San Marcos; PerúFil: Blundo, Cecilia Mabel. Universidad Nacional de Tucumán. Facultad de Ciencias Naturales e Instituto Miguel Lillo; Argentina. Universidad Nacional de Tucumán. Facultad de Ciencias Naturales e Instituto Miguel Lillo. Laboratorio de Investigaciones Ecológicas de las Yungas; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán; ArgentinaFil: Boza Espinoza, Tatiana Erika. Missouri Botanical Garden; Estados UnidosFil: Fuentes Claros, Alfredo. Herbario Nacional de Bolivia; BoliviaFil: Gaviria, Juan. Universidad de Los Andes; VenezuelaFil: Gutiérrez, Néstor. Universidad de Los Andes; VenezuelaFil: Khela, Sonia. Botanic Gardens Conservation International; Reino UnidoFil: León, Blanca. University of Texas at Austin; Estados UnidosFil: la Torre Cuadros, Maria De Los Angeles. Universidad Nacional Agraria; PerúFil: López Camacho, René. Universidad Distrital; ColombiaFil: Malizia, Lucio Ricardo. Universidad Nacional de Jujuy. Facultad de Ciencias Agrarias. Centro de Estudios Ambientales Territoriales y Sociales; ArgentinaFil: Millán, Betty. Universidad Nacional Mayor de San Marcos; PerúFil: Moraes R., Mónica. Herbario Nacional de Bolivia; BoliviaFil: Newton, Adrian C.. Bournemouth University; Reino UnidoFil: Pacheco, Silvia. Fundación Proyungas; ArgentinaFil: Reynel, Carlos. Universidad Nacional Agraria; PerúFil: Ulloa Ulloa, Carmen. Missouri Botanical Garden; Estados UnidosFil: Vacas Cruz,Omar. Pontificia Universidad Católica del Ecuador; Ecuado

Effect of viral storm in patients admitted to intensive care units with severe COVID-19 in Spain: a multicentre, prospective, cohort study

Background: The contribution of the virus to the pathogenesis of severe COVID-19 is still unclear. We aimed to evaluate associations between viral RNA load in plasma and host response, complications, and deaths in critically ill patients with COVID-19. Methods: We did a prospective cohort study across 23 hospitals in Spain. We included patients aged 18 years or older with laboratory-confirmed SARS-CoV-2 infection who were admitted to an intensive care unit between March 16, 2020, and Feb 27, 2021. RNA of the SARS-CoV-2 nucleocapsid region 1 (N1) was quantified in plasma samples collected from patients in the first 48 h following admission, using digital PCR. Patients were grouped on the basis of N1 quantity: VIR-N1-Zero (2747 N1 copies per mL). The primary outcome was all-cause death within 90 days after admission. We evaluated odds ratios (ORs) for the primary outcome between groups using a logistic regression analysis. Findings: 1068 patients met the inclusion criteria, of whom 117 had insufficient plasma samples and 115 had key information missing. 836 patients were included in the analysis, of whom 403 (48%) were in the VIR-N1-Low group, 283 (34%) were in the VIR-N1-Storm group, and 150 (18%) were in the VIR-N1-Zero group. Overall, patients in the VIR-N1-Storm group had the most severe disease: 266 (94%) of 283 patients received invasive mechanical ventilation (IMV), 116 (41%) developed acute kidney injury, 180 (65%) had secondary infections, and 148 (52%) died within 90 days. Patients in the VIR-N1-Zero group had the least severe disease: 81 (54%) of 150 received IMV, 34 (23%) developed acute kidney injury, 47 (32%) had secondary infections, and 26 (17%) died within 90 days (OR for death 0·30, 95% CI 0·16-0·55; p<0·0001, compared with the VIR-N1-Storm group). 106 (26%) of 403 patients in the VIR-N1-Low group died within 90 days (OR for death 0·39, 95% CI 0·26-0·57; p<0·0001, compared with the VIR-N1-Storm group). Interpretation: The presence of a so-called viral storm is associated with increased all-cause death in patients admitted to the intensive care unit with severe COVID-19. Preventing this viral storm could help to reduce poor outcomes. Viral storm could be an enrichment marker for treatment with antivirals or purification devices to remove viral components from the blood.This work was supported by grants from the Instituto de Salud Carlos III (FONDO-COVID19, COV20/00110, CIBERES, 06/06/0028; AT), Proyectos de Investigación en Salud (PI19/00590; JFB-M), Miguel Servet (CP20/00041; DdG-C), Sara Borrell (CD018/0123; APT), and Predoctorales de Formación en Investigación en Salud (FI20/00278; AdF). We also received funds from Programa de Donaciones Estar Preparados, UNESPA (Madrid, Spain), and from the Canadian Institutes of Health Research (CIHR OV2–170357; DJK and JFB-M), Research Nova Scotia, Li-Ka Shing Foundation (DJK), and finally by a Research Grant 2020 from ESCMID (APT). COV20/00110, PI19/00590, CP20/00041, CD018/0123, FI20/00278 were co-funded by European Regional Development Fund and European Social Fund (A way to make Europe, and Investing in your future). We thank the IRB-Lleida Biobank 119 (B.0000682) and Plataforma Biobancos PT17/0015/0027 in Lleida, the Hospital Clinic Barcelona (HCB)-IDIBAPS biobank in Barcelona, and the National DNA Bank and the Hospital Universitario de Salamanca biobank (both in Salamanca) for their logistical support with sample processing and storage. We are indebted to the Fundació Glòria Soler for its contribution and support to the COVIDBANK of HCBIDIBAPS Biobank. This work was not supported by any pharmaceutical company or other agency.S

A collaboratively derived environmental research agenda for Galapagos

Galápagos is one of the most pristine archipelagos in the world and its conservation relies upon research and sensible management. In recent decades both the interest in, and the needs of, the islands have increased, yet the funds and capacity for necessary research have remained limited. It has become, therefore, increasingly important to identify areas of priority research to assist decision-making in Galápagos conservation. This study identified 50 questions considered priorities for future research and management. The exercise involved the collaboration of policy makers, practitioners and researchers from more than 30 different organisations. Initially, 360 people were consulted to generate 781 questions. An established process of preworkshop voting and three rounds to reduce and reword the questions, followed by a two-day workshop, was used to produce the final 50 questions. The most common issues raised by this list of questions were human population growth, climate change and the impact of invasive alien species. These results have already been used by a range of organisations and politicians and are expected to provide the basis for future research on the islands so that its sustainability may be enhanced. </jats:p

Spices to Control COVID-19 Symptoms:Yes, but Not Only…

There are large country variations in COVID-19 death rates that may be partly explained by diet. Many countries with low COVID-19 death rates have a common feature of eating large quantities of fermented vegetables such as cabbage and, in some continents, various spices. Fermented vegetables and spices are agonists of the antioxidant transcription factor nuclear factor (erythroid-derived 2)-like 2 (Nrf2), and spices are transient receptor potential ankyrin 1 and vanillin 1 (TRPA1/V1) agonists. These mechanisms may explain many COVID-19 symptoms and severity. It appears that there is a synergy between Nrf2 and TRPA1/V1 foods that may explain the role of diet in COVID-19. One of the mechanisms of COVID-19 appears to be an oxygen species (ROS)-mediated process in synergy with TRP channels, modulated by Nrf2 pathways. Spicy foods are likely to desensitize TRP channels and act in synergy with exogenous antioxidants that activate the Nrf2 pathway